PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0124s0170.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 191aa    MW: 21112.5 Da    PI: 8.0527
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0124s0170.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.4e-2197149156
                     AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                             s+y+GVr+++ +g+++AeIrdp++ng  +r +lg++ t+e+Aa a+++a+ k++g+
  SapurV1A.0124s0170.1.p  97 SQYRGVRRRP-WGKYAAEIRDPKKNG--ARMWLGTYETPEDAALAYDQAAFKIRGN 149
                             78********.***********9998..*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.8E-1497148IPR001471AP2/ERF domain
CDDcd000182.93E-3197158No hitNo description
SuperFamilySSF541717.85E-2497157IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.6E-3298157IPR001471AP2/ERF domain
PROSITE profilePS5103224.01298156IPR001471AP2/ERF domain
SMARTSM003808.3E-3898162IPR001471AP2/ERF domain
PRINTSPR003671.9E-1399110IPR001471AP2/ERF domain
PRINTSPR003671.9E-13138158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MSQGGNNSLG SEDLDFLESI QQYLVSTTDR DFDTLMSTCP RMENSEGTAS SFCSDHDILF  60
NDSMTSTTLA VFESDPQGQG IPAVEVACKS NARPKGSQYR GVRRRPWGKY AAEIRDPKKN  120
GARMWLGTYE TPEDAALAYD QAAFKIRGNK AKLNFPHLIG STEYEPVRVT SKRRSPEPAL  180
VHDGSPKRRK *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-3195163270ATERF1
3gcc_A1e-3195163270ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171189KRRSPEPALVHDGSPKRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006375130.11e-122hypothetical protein POPTR_0014s04640g
SwissprotQ8L9K17e-51ERF99_ARATH; Ethylene-responsive transcription factor 13
TrEMBLB9MV941e-122B9MV94_POPTR; Uncharacterized protein
STRINGPOPTR_0014s04640.14e-97(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51233157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-52ethylene-responsive element binding factor 13